Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1bP97952 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1bP97952 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1bP97952 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Scn1bP97952 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1bP97952 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1bP97952 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1bP97952 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Scn1bP97952 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1bP97952 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Scn1bP97952 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1bP97952 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.71□□□□□ -0.37
Scn1bP97952 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1bP97952 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1bP97952 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1bP97952 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1bP97952 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1bP97952 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1bP97952 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1bP97952 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1bP97952 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1bP97952 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1bP97952 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1bP97952 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1bP97952 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1bP97952 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1bP97952 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1bP97952 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1bP97952 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.7□□□□□ -0.38
Scn1bP97952 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Scn1bP97952 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Gm25990-201ENSMUST00000102440 86 ntBASIC12.7□□□□□ -0.38
Scn1bP97952 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Scn1bP97952 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Scn1bP97952 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.7□□□□□ -0.38
Scn1bP97952 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.7□□□□□ -0.38
Scn1bP97952 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.7□□□□□ -0.38
Scn1bP97952 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.7□□□□□ -0.38
Scn1bP97952 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Scn1bP97952 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1bP97952 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Scn1bP97952 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Scn1bP97952 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.7□□□□□ -0.38
Scn1bP97952 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.7□□□□□ -0.38
Scn1bP97952 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Scn1bP97952 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1bP97952 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1bP97952 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.69□□□□□ -0.38
Scn1bP97952 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1bP97952 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1bP97952 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.69□□□□□ -0.38
Scn1bP97952 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1bP97952 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1bP97952 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Scn1bP97952 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Scn1bP97952 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Scn1bP97952 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1bP97952 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1bP97952 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Scn1bP97952 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.69□□□□□ -0.38
Scn1bP97952 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1bP97952 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1bP97952 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.69□□□□□ -0.38
Scn1bP97952 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1bP97952 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1bP97952 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.69□□□□□ -0.38
Scn1bP97952 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Scn1bP97952 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1bP97952 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Scn1bP97952 Gm37153-201ENSMUST00000193637 231 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms