Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cacna1aP97445 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cacna1aP97445 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Gm5363-201ENSMUST00000211927 938 ntBASIC12.83□□□□□ -0.36
Cacna1aP97445 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.83□□□□□ -0.36
Cacna1aP97445 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.83□□□□□ -0.36
Cacna1aP97445 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Cacna1aP97445 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cacna1aP97445 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cacna1aP97445 Gm12485-201ENSMUST00000119641 291 ntBASIC12.82□□□□□ -0.36
Cacna1aP97445 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.82□□□□□ -0.36
Cacna1aP97445 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.82□□□□□ -0.36
Cacna1aP97445 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cacna1aP97445 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.82□□□□□ -0.36
Cacna1aP97445 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cacna1aP97445 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1aP97445 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cacna1aP97445 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.81□□□□□ -0.36
Cacna1aP97445 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Proscos-202ENSMUST00000178990 666 ntBASIC12.81□□□□□ -0.36
Cacna1aP97445 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.81□□□□□ -0.36
Cacna1aP97445 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cacna1aP97445 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.81□□□□□ -0.36
Cacna1aP97445 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Cacna1aP97445 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Gm29649-201ENSMUST00000185649 419 ntBASIC12.81□□□□□ -0.36
Cacna1aP97445 Gm40466-201ENSMUST00000212174 422 ntBASIC12.81□□□□□ -0.36
Cacna1aP97445 Gm45880-201ENSMUST00000213041 853 ntBASIC12.81□□□□□ -0.36
Cacna1aP97445 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.81□□□□□ -0.36
Cacna1aP97445 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.81□□□□□ -0.36
Cacna1aP97445 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1aP97445 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.8□□□□□ -0.36
Cacna1aP97445 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cacna1aP97445 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Cacna1aP97445 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cacna1aP97445 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1aP97445 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms