Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Shox2P70390 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Shox2P70390 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.74□□□□□ -0.21
Shox2P70390 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.74□□□□□ -0.21
Shox2P70390 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.74□□□□□ -0.21
Shox2P70390 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Shox2P70390 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Shox2P70390 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shox2P70390 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Shox2P70390 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Shox2P70390 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Shox2P70390 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.73□□□□□ -0.21
Shox2P70390 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Shox2P70390 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Shox2P70390 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Gm4899-201ENSMUST00000178708 719 ntBASIC13.73□□□□□ -0.21
Shox2P70390 Gm45167-201ENSMUST00000208007 322 ntBASIC13.73□□□□□ -0.21
Shox2P70390 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Shox2P70390 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.73□□□□□ -0.21
Shox2P70390 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.73□□□□□ -0.21
Shox2P70390 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.73□□□□□ -0.21
Shox2P70390 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.73□□□□□ -0.21
Shox2P70390 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Shox2P70390 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Shox2P70390 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.73□□□□□ -0.21
Shox2P70390 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Shox2P70390 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shox2P70390 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.72□□□□□ -0.21
Shox2P70390 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.72□□□□□ -0.21
Shox2P70390 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.72□□□□□ -0.21
Shox2P70390 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.72□□□□□ -0.21
Shox2P70390 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Shox2P70390 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.72□□□□□ -0.21
Shox2P70390 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms