Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lim2P56563 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lim2P56563 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.92□□□□□ -0.18
Lim2P56563 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.92□□□□□ -0.18
Lim2P56563 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lim2P56563 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lim2P56563 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lim2P56563 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lim2P56563 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lim2P56563 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lim2P56563 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Lim2P56563 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lim2P56563 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lim2P56563 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lim2P56563 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.91□□□□□ -0.18
Lim2P56563 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Lim2P56563 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.91□□□□□ -0.18
Lim2P56563 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.91□□□□□ -0.18
Lim2P56563 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lim2P56563 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Gm27437-201ENSMUST00000183429 107 ntBASIC13.91□□□□□ -0.18
Lim2P56563 Gm21470-201ENSMUST00000187680 696 ntBASIC13.91□□□□□ -0.18
Lim2P56563 Gm37714-201ENSMUST00000194742 342 ntBASIC13.91□□□□□ -0.18
Lim2P56563 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.91□□□□□ -0.18
Lim2P56563 Gm18027-201ENSMUST00000218947 619 ntBASIC13.91□□□□□ -0.18
Lim2P56563 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.91□□□□□ -0.18
Lim2P56563 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lim2P56563 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Lim2P56563 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lim2P56563 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Lim2P56563 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.9□□□□□ -0.18
Lim2P56563 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.9□□□□□ -0.18
Lim2P56563 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.9□□□□□ -0.18
Lim2P56563 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Lim2P56563 Gm16215-201ENSMUST00000161990 637 ntBASIC13.9□□□□□ -0.18
Lim2P56563 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.9□□□□□ -0.18
Lim2P56563 Gm24694-201ENSMUST00000180054 110 ntBASIC13.9□□□□□ -0.18
Lim2P56563 Gm9522-201ENSMUST00000182394 926 ntBASIC13.9□□□□□ -0.18
Lim2P56563 Gm27663-201ENSMUST00000184839 110 ntBASIC13.9□□□□□ -0.18
Lim2P56563 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Lim2P56563 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.9□□□□□ -0.18
Lim2P56563 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Lim2P56563 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.9□□□□□ -0.18
Lim2P56563 Gm20445-201ENSMUST00000061905 565 ntBASIC13.9□□□□□ -0.18
Lim2P56563 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.9□□□□□ -0.18
Lim2P56563 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Lim2P56563 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lim2P56563 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Lim2P56563 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Lim2P56563 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Lim2P56563 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lim2P56563 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lim2P56563 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.89□□□□□ -0.19
Lim2P56563 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lim2P56563 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Lim2P56563 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Lim2P56563 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Lim2P56563 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Lim2P56563 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Lim2P56563 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Lim2P56563 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lim2P56563 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lim2P56563 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms