Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cdh11P55288 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdh11P55288 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cdh11P55288 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.71□□□□□ -0.37
Cdh11P55288 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cdh11P55288 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.71□□□□□ -0.37
Cdh11P55288 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.71□□□□□ -0.37
Cdh11P55288 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cdh11P55288 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.71□□□□□ -0.37
Cdh11P55288 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.71□□□□□ -0.37
Cdh11P55288 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.71□□□□□ -0.37
Cdh11P55288 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.71□□□□□ -0.37
Cdh11P55288 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.71□□□□□ -0.37
Cdh11P55288 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.71□□□□□ -0.37
Cdh11P55288 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.71□□□□□ -0.37
Cdh11P55288 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cdh11P55288 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh11P55288 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh11P55288 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh11P55288 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh11P55288 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh11P55288 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh11P55288 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh11P55288 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh11P55288 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh11P55288 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.71□□□□□ -0.38
Cdh11P55288 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh11P55288 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cdh11P55288 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cdh11P55288 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.7□□□□□ -0.38
Cdh11P55288 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Cdh11P55288 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cdh11P55288 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.7□□□□□ -0.38
Cdh11P55288 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.7□□□□□ -0.38
Cdh11P55288 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.7□□□□□ -0.38
Cdh11P55288 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.7□□□□□ -0.38
Cdh11P55288 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.7□□□□□ -0.38
Cdh11P55288 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh11P55288 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.7□□□□□ -0.38
Cdh11P55288 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.7□□□□□ -0.38
Cdh11P55288 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.7□□□□□ -0.38
Cdh11P55288 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.69□□□□□ -0.38
Cdh11P55288 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdh11P55288 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.69□□□□□ -0.38
Cdh11P55288 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.69□□□□□ -0.38
Cdh11P55288 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.69□□□□□ -0.38
Cdh11P55288 Gm15483-201ENSMUST00000120338 456 ntBASIC12.69□□□□□ -0.38
Cdh11P55288 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdh11P55288 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.69□□□□□ -0.38
Cdh11P55288 Gm2451-201ENSMUST00000199447 999 ntBASIC12.69□□□□□ -0.38
Cdh11P55288 Gm10290-201ENSMUST00000200451 999 ntBASIC12.69□□□□□ -0.38
Cdh11P55288 Olfr286-202ENSMUST00000205305 969 ntBASIC12.69□□□□□ -0.38
Cdh11P55288 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms