Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx3P50481 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lhx3P50481 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx3P50481 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx3P50481 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.08□□□□□ -0.16
Lhx3P50481 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx3P50481 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Lhx3P50481 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Lhx3P50481 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Gm12341-201ENSMUST00000119724 503 ntBASIC14.07□□□□□ -0.16
Lhx3P50481 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.07□□□□□ -0.16
Lhx3P50481 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.07□□□□□ -0.16
Lhx3P50481 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lhx3P50481 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.07□□□□□ -0.16
Lhx3P50481 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Lhx3P50481 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Lhx3P50481 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Lhx3P50481 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lhx3P50481 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx3P50481 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Lhx3P50481 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Gm11524-201ENSMUST00000119349 807 ntBASIC14.06□□□□□ -0.16
Lhx3P50481 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.06□□□□□ -0.16
Lhx3P50481 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.06□□□□□ -0.16
Lhx3P50481 Gm26464-201ENSMUST00000157094 305 ntBASIC14.06□□□□□ -0.16
Lhx3P50481 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Lhx3P50481 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.06□□□□□ -0.16
Lhx3P50481 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.06□□□□□ -0.16
Lhx3P50481 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.06□□□□□ -0.16
Lhx3P50481 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Lhx3P50481 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lhx3P50481 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Lhx3P50481 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx3P50481 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.05□□□□□ -0.16
Lhx3P50481 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx3P50481 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx3P50481 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx3P50481 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx3P50481 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx3P50481 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Lhx3P50481 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx3P50481 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx3P50481 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx3P50481 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
Lhx3P50481 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx3P50481 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx3P50481 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.05□□□□□ -0.16
Lhx3P50481 Gm14928-201ENSMUST00000120198 477 ntBASIC14.05□□□□□ -0.16
Lhx3P50481 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.05□□□□□ -0.16
Lhx3P50481 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.05□□□□□ -0.16
Lhx3P50481 Mir6392-201ENSMUST00000184924 108 ntBASIC14.05□□□□□ -0.16
Lhx3P50481 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.05□□□□□ -0.16
Lhx3P50481 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.05□□□□□ -0.16
Lhx3P50481 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.05□□□□□ -0.16
Lhx3P50481 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.05□□□□□ -0.16
Lhx3P50481 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.05□□□□□ -0.16
Lhx3P50481 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx3P50481 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx3P50481 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms