Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Shmt1P50431 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shmt1P50431 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shmt1P50431 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shmt1P50431 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shmt1P50431 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Shmt1P50431 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shmt1P50431 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shmt1P50431 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shmt1P50431 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shmt1P50431 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shmt1P50431 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shmt1P50431 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.69□□□□□ -0.06
Shmt1P50431 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.69□□□□□ -0.06
Shmt1P50431 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Shmt1P50431 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shmt1P50431 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shmt1P50431 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shmt1P50431 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shmt1P50431 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shmt1P50431 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.69□□□□□ -0.06
Shmt1P50431 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Shmt1P50431 Gm18905-201ENSMUST00000205454 928 ntBASIC14.69□□□□□ -0.06
Shmt1P50431 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.69□□□□□ -0.06
Shmt1P50431 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shmt1P50431 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Shmt1P50431 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Shmt1P50431 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.69□□□□□ -0.06
Shmt1P50431 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.69□□□□□ -0.06
Shmt1P50431 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shmt1P50431 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Shmt1P50431 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shmt1P50431 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shmt1P50431 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shmt1P50431 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.69□□□□□ -0.06
Shmt1P50431 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.68□□□□□ -0.06
Shmt1P50431 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.68□□□□□ -0.06
Shmt1P50431 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Shmt1P50431 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Shmt1P50431 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
Shmt1P50431 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.68□□□□□ -0.06
Shmt1P50431 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Gm23984-201ENSMUST00000157139 203 ntBASIC14.68□□□□□ -0.06
Shmt1P50431 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.68□□□□□ -0.06
Shmt1P50431 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Shmt1P50431 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Shmt1P50431 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.68□□□□□ -0.06
Shmt1P50431 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.68□□□□□ -0.06
Shmt1P50431 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.68□□□□□ -0.06
Shmt1P50431 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Shmt1P50431 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.68□□□□□ -0.06
Shmt1P50431 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shmt1P50431 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shmt1P50431 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.67□□□□□ -0.06
Shmt1P50431 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shmt1P50431 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shmt1P50431 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shmt1P50431 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.67□□□□□ -0.06
Shmt1P50431 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shmt1P50431 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Shmt1P50431 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.67□□□□□ -0.06
Shmt1P50431 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.67□□□□□ -0.06
Shmt1P50431 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.67□□□□□ -0.06
Shmt1P50431 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shmt1P50431 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Shmt1P50431 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shmt1P50431 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Shmt1P50431 Gm37917-201ENSMUST00000194711 392 ntBASIC14.67□□□□□ -0.06
Shmt1P50431 Gm6745-201ENSMUST00000199216 526 ntBASIC14.67□□□□□ -0.06
Shmt1P50431 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.67□□□□□ -0.06
Shmt1P50431 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shmt1P50431 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Shmt1P50431 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shmt1P50431 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shmt1P50431 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Shmt1P50431 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms