Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.54□□□□□ -0.56
Nkx2-1P50220 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.54□□□□□ -0.56
Nkx2-1P50220 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Gm10275-202ENSMUST00000168697 495 ntBASIC11.53□□□□□ -0.56
Nkx2-1P50220 Mir5131-201ENSMUST00000175426 93 ntBASIC11.53□□□□□ -0.56
Nkx2-1P50220 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Gm2272-201ENSMUST00000194903 582 ntBASIC11.53□□□□□ -0.56
Nkx2-1P50220 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Gm10275-201ENSMUST00000092620 635 ntBASIC11.53□□□□□ -0.56
Nkx2-1P50220 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx2-1P50220 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx2-1P50220 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx2-1P50220 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx2-1P50220 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx2-1P50220 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx2-1P50220 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx2-1P50220 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx2-1P50220 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx2-1P50220 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx2-1P50220 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx2-1P50220 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.52□□□□□ -0.57
Nkx2-1P50220 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Gm16026-204ENSMUST00000162652 683 ntBASIC11.52□□□□□ -0.57
Nkx2-1P50220 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Gm27741-201ENSMUST00000185060 237 ntBASIC11.52□□□□□ -0.57
Nkx2-1P50220 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkx2-1P50220 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.52□□□□□ -0.57
Nkx2-1P50220 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.52□□□□□ -0.57
Nkx2-1P50220 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.52□□□□□ -0.57
Nkx2-1P50220 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Nkx2-1P50220 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms