Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Brca1P48754 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Brca1P48754 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Brca1P48754 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Brca1P48754 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Brca1P48754 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Brca1P48754 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Brca1P48754 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Brca1P48754 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Brca1P48754 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Brca1P48754 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Brca1P48754 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Brca1P48754 Gm7857-201ENSMUST00000117957 358 ntBASIC15.32■□□□□ 0.04
Brca1P48754 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.32■□□□□ 0.04
Brca1P48754 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.32■□□□□ 0.04
Brca1P48754 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.32■□□□□ 0.04
Brca1P48754 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Brca1P48754 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Brca1P48754 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Brca1P48754 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Brca1P48754 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Brca1P48754 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Brca1P48754 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Brca1P48754 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Brca1P48754 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Brca1P48754 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Brca1P48754 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.32■□□□□ 0.04
Brca1P48754 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Brca1P48754 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Brca1P48754 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Brca1P48754 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Brca1P48754 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Brca1P48754 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.31■□□□□ 0.04
Brca1P48754 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.31■□□□□ 0.04
Brca1P48754 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC15.31■□□□□ 0.04
Brca1P48754 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Brca1P48754 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.31■□□□□ 0.04
Brca1P48754 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Brca1P48754 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Gm14028-201ENSMUST00000117434 479 ntBASIC15.31■□□□□ 0.04
Brca1P48754 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC15.31■□□□□ 0.04
Brca1P48754 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC15.31■□□□□ 0.04
Brca1P48754 Gm24548-201ENSMUST00000158650 108 ntBASIC15.31■□□□□ 0.04
Brca1P48754 Gm5781-201ENSMUST00000219792 443 ntBASIC15.31■□□□□ 0.04
Brca1P48754 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Brca1P48754 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Brca1P48754 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
Brca1P48754 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Brca1P48754 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Brca1P48754 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.3■□□□□ 0.04
Brca1P48754 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Brca1P48754 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Brca1P48754 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.3■□□□□ 0.04
Brca1P48754 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.3■□□□□ 0.04
Brca1P48754 Mir6927-201ENSMUST00000184494 71 ntBASIC15.3■□□□□ 0.04
Brca1P48754 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.3■□□□□ 0.04
Brca1P48754 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.3■□□□□ 0.04
Brca1P48754 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Brca1P48754 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Brca1P48754 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Brca1P48754 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms