Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.21□□□□□ -0.45
GdnfP48540 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
GdnfP48540 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC12.21□□□□□ -0.45
GdnfP48540 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GdnfP48540 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GdnfP48540 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GdnfP48540 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GdnfP48540 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.21□□□□□ -0.45
GdnfP48540 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
GdnfP48540 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.21□□□□□ -0.45
GdnfP48540 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
GdnfP48540 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
GdnfP48540 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
GdnfP48540 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
GdnfP48540 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
GdnfP48540 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
GdnfP48540 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
GdnfP48540 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
GdnfP48540 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
GdnfP48540 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
GdnfP48540 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
GdnfP48540 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
GdnfP48540 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
GdnfP48540 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.2□□□□□ -0.46
GdnfP48540 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
GdnfP48540 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
GdnfP48540 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
GdnfP48540 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
GdnfP48540 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
GdnfP48540 Gm8749-201ENSMUST00000117737 331 ntBASIC12.2□□□□□ -0.46
GdnfP48540 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.2□□□□□ -0.46
GdnfP48540 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.2□□□□□ -0.46
GdnfP48540 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.2□□□□□ -0.46
GdnfP48540 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.2□□□□□ -0.46
GdnfP48540 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
GdnfP48540 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
GdnfP48540 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
GdnfP48540 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
GdnfP48540 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.2□□□□□ -0.46
GdnfP48540 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
GdnfP48540 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
GdnfP48540 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.19□□□□□ -0.46
GdnfP48540 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.19□□□□□ -0.46
GdnfP48540 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.19□□□□□ -0.46
GdnfP48540 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.19□□□□□ -0.46
GdnfP48540 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.19□□□□□ -0.46
GdnfP48540 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.19□□□□□ -0.46
GdnfP48540 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.19□□□□□ -0.46
GdnfP48540 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
GdnfP48540 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
GdnfP48540 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.19□□□□□ -0.46
GdnfP48540 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.19□□□□□ -0.46
GdnfP48540 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.19□□□□□ -0.46
GdnfP48540 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms