Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.43□□□□□ -0.26
Tnfsf4P43488 Gm15467-201ENSMUST00000120582 445 ntBASIC13.43□□□□□ -0.26
Tnfsf4P43488 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.43□□□□□ -0.26
Tnfsf4P43488 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.43□□□□□ -0.26
Tnfsf4P43488 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.43□□□□□ -0.26
Tnfsf4P43488 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.43□□□□□ -0.26
Tnfsf4P43488 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.43□□□□□ -0.26
Tnfsf4P43488 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.43□□□□□ -0.26
Tnfsf4P43488 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Grk6-205ENSMUST00000224653 2976 ntBASIC13.43□□□□□ -0.26
Tnfsf4P43488 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Tnfsf4P43488 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Tnfsf4P43488 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.42□□□□□ -0.26
Tnfsf4P43488 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.42□□□□□ -0.26
Tnfsf4P43488 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.42□□□□□ -0.26
Tnfsf4P43488 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.42□□□□□ -0.26
Tnfsf4P43488 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.42□□□□□ -0.26
Tnfsf4P43488 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.42□□□□□ -0.26
Tnfsf4P43488 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Tnfsf4P43488 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.42□□□□□ -0.26
Tnfsf4P43488 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.42□□□□□ -0.26
Tnfsf4P43488 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.42□□□□□ -0.26
Tnfsf4P43488 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf4P43488 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.41□□□□□ -0.26
Tnfsf4P43488 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms