Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcam1P29533 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vcam1P29533 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Vcam1P29533 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcam1P29533 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcam1P29533 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcam1P29533 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcam1P29533 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Vcam1P29533 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.91■□□□□ 0.14
Vcam1P29533 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcam1P29533 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcam1P29533 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcam1P29533 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcam1P29533 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Vcam1P29533 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Vcam1P29533 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 Gm23931-201ENSMUST00000103842 109 ntBASIC15.9■□□□□ 0.14
Vcam1P29533 Gm8062-201ENSMUST00000139696 444 ntBASIC15.9■□□□□ 0.14
Vcam1P29533 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Vcam1P29533 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.9■□□□□ 0.14
Vcam1P29533 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vcam1P29533 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.9■□□□□ 0.14
Vcam1P29533 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.9■□□□□ 0.14
Vcam1P29533 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.9■□□□□ 0.14
Vcam1P29533 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.9■□□□□ 0.14
Vcam1P29533 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.9■□□□□ 0.14
Vcam1P29533 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcam1P29533 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.9■□□□□ 0.14
Vcam1P29533 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.9■□□□□ 0.14
Vcam1P29533 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.89■□□□□ 0.13
Vcam1P29533 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.89■□□□□ 0.13
Vcam1P29533 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Vcam1P29533 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Vcam1P29533 Gm16177-201ENSMUST00000120728 718 ntBASIC15.89■□□□□ 0.13
Vcam1P29533 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Vcam1P29533 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Vcam1P29533 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Vcam1P29533 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.89■□□□□ 0.13
Vcam1P29533 Gm6007-201ENSMUST00000208170 823 ntBASIC15.89■□□□□ 0.13
Vcam1P29533 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.89■□□□□ 0.13
Vcam1P29533 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
Vcam1P29533 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Vcam1P29533 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.89■□□□□ 0.13
Vcam1P29533 Gm26315-201ENSMUST00000083890 321 ntBASIC15.89■□□□□ 0.13
Vcam1P29533 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Vcam1P29533 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.89■□□□□ 0.13
Vcam1P29533 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vcam1P29533 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcam1P29533 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.88■□□□□ 0.13
Vcam1P29533 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Vcam1P29533 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcam1P29533 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcam1P29533 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcam1P29533 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcam1P29533 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcam1P29533 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcam1P29533 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.88■□□□□ 0.13
Vcam1P29533 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.88■□□□□ 0.13
Vcam1P29533 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vcam1P29533 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcam1P29533 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.88■□□□□ 0.13
Vcam1P29533 Gm8213-201ENSMUST00000118191 441 ntBASIC15.88■□□□□ 0.13
Vcam1P29533 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.88■□□□□ 0.13
Vcam1P29533 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.88■□□□□ 0.13
Vcam1P29533 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vcam1P29533 Gm38144-201ENSMUST00000192790 465 ntBASIC15.88■□□□□ 0.13
Vcam1P29533 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vcam1P29533 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Vcam1P29533 Itm2b-204ENSMUST00000228637 783 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms