Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Hoxd8P23463 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.27□□□□□ -0.12
Hoxd8P23463 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxd8P23463 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Hoxd8P23463 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxd8P23463 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.27□□□□□ -0.12
Hoxd8P23463 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.27□□□□□ -0.12
Hoxd8P23463 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxd8P23463 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxd8P23463 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxd8P23463 Gm5187-201ENSMUST00000117317 991 ntBASIC14.27□□□□□ -0.13
Hoxd8P23463 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.27□□□□□ -0.13
Hoxd8P23463 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.27□□□□□ -0.13
Hoxd8P23463 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxd8P23463 Gm17420-201ENSMUST00000164753 153 ntBASIC14.27□□□□□ -0.13
Hoxd8P23463 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Hoxd8P23463 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.27□□□□□ -0.13
Hoxd8P23463 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.27□□□□□ -0.13
Hoxd8P23463 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.27□□□□□ -0.13
Hoxd8P23463 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxd8P23463 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxd8P23463 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxd8P23463 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxd8P23463 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxd8P23463 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxd8P23463 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxd8P23463 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxd8P23463 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxd8P23463 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.27□□□□□ -0.13
Hoxd8P23463 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxd8P23463 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxd8P23463 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxd8P23463 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Gm38116-201ENSMUST00000193873 1533 ntBASIC14.26□□□□□ -0.13
Hoxd8P23463 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.26□□□□□ -0.13
Hoxd8P23463 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.26□□□□□ -0.13
Hoxd8P23463 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Hoxd8P23463 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.26□□□□□ -0.13
Hoxd8P23463 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.26□□□□□ -0.13
Hoxd8P23463 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.26□□□□□ -0.13
Hoxd8P23463 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxd8P23463 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.26□□□□□ -0.13
Hoxd8P23463 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.26□□□□□ -0.13
Hoxd8P23463 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.26□□□□□ -0.13
Hoxd8P23463 Gm4271-201ENSMUST00000174444 973 ntBASIC14.26□□□□□ -0.13
Hoxd8P23463 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.26□□□□□ -0.13
Hoxd8P23463 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.26□□□□□ -0.13
Hoxd8P23463 Thoc7-209ENSMUST00000225325 765 ntBASIC14.26□□□□□ -0.13
Hoxd8P23463 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hoxd8P23463 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxd8P23463 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Hoxd8P23463 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxd8P23463 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxd8P23463 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.25□□□□□ -0.13
Hoxd8P23463 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxd8P23463 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hoxd8P23463 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxd8P23463 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxd8P23463 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxd8P23463 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxd8P23463 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxd8P23463 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxd8P23463 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxd8P23463 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxd8P23463 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
Hoxd8P23463 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxd8P23463 Gm12203-201ENSMUST00000118235 598 ntBASIC14.25□□□□□ -0.13
Hoxd8P23463 Gm12209-201ENSMUST00000120089 596 ntBASIC14.25□□□□□ -0.13
Hoxd8P23463 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.25□□□□□ -0.13
Hoxd8P23463 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxd8P23463 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hoxd8P23463 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.25□□□□□ -0.13
Hoxd8P23463 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.25□□□□□ -0.13
Hoxd8P23463 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.25□□□□□ -0.13
Hoxd8P23463 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.25□□□□□ -0.13
Hoxd8P23463 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms