Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm21896-201ENSMUST00000186520 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm21873-201ENSMUST00000186728 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm21794-201ENSMUST00000187056 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm21880-201ENSMUST00000187275 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm21826-201ENSMUST00000187451 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm21198-201ENSMUST00000188393 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm21749-201ENSMUST00000189343 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm21901-201ENSMUST00000189568 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm29424-201ENSMUST00000189716 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm28599-201ENSMUST00000189838 694 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm21867-201ENSMUST00000189917 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm29269-201ENSMUST00000190087 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm21722-201ENSMUST00000190153 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm28423-201ENSMUST00000190701 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm21899-201ENSMUST00000190745 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm21910-201ENSMUST00000191163 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm21849-201ENSMUST00000191571 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm28678-201ENSMUST00000191593 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm20910-201ENSMUST00000193268 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm21871-201ENSMUST00000194621 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 AA619741-201ENSMUST00000195095 646 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.02□□□□□ -0.33
Clk1P22518 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Clk1P22518 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Clk1P22518 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Clk1P22518 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Clk1P22518 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Clk1P22518 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Clk1P22518 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.02□□□□□ -0.33
Clk1P22518 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Map1b-203ENSMUST00000223725 2669 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Clk1P22518 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.01□□□□□ -0.33
Clk1P22518 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.01□□□□□ -0.33
Clk1P22518 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Clk1P22518 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Clk1P22518 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Clk1P22518 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.01□□□□□ -0.33
Clk1P22518 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Clk1P22518 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.01□□□□□ -0.33
Clk1P22518 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clk1P22518 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Clk1P22518 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Clk1P22518 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13□□□□□ -0.33
Clk1P22518 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13□□□□□ -0.33
Clk1P22518 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Clk1P22518 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clk1P22518 Gm23935-201ENSMUST00000102303 57 ntBASIC13□□□□□ -0.33
Clk1P22518 Gm24270-201ENSMUST00000102326 57 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms