Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Fv4P11370 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Fv4P11370 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.46□□□□□ -0.25
Fv4P11370 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.46□□□□□ -0.25
Fv4P11370 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.46□□□□□ -0.25
Fv4P11370 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.46□□□□□ -0.25
Fv4P11370 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.46□□□□□ -0.25
Fv4P11370 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Fv4P11370 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fv4P11370 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.46□□□□□ -0.25
Fv4P11370 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Fv4P11370 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Fv4P11370 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Fv4P11370 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Fv4P11370 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Fv4P11370 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Fv4P11370 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Fv4P11370 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.46□□□□□ -0.26
Fv4P11370 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Fv4P11370 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Fv4P11370 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.45□□□□□ -0.26
Fv4P11370 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.45□□□□□ -0.26
Fv4P11370 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Gm43514-201ENSMUST00000198852 424 ntBASIC13.45□□□□□ -0.26
Fv4P11370 Gm44719-201ENSMUST00000206404 149 ntBASIC13.45□□□□□ -0.26
Fv4P11370 Gm16476-201ENSMUST00000221544 139 ntBASIC13.45□□□□□ -0.26
Fv4P11370 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.45□□□□□ -0.26
Fv4P11370 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Fv4P11370 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.45□□□□□ -0.26
Fv4P11370 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.45□□□□□ -0.26
Fv4P11370 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fv4P11370 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.44□□□□□ -0.26
Fv4P11370 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Fv4P11370 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.44□□□□□ -0.26
Fv4P11370 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Fv4P11370 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Gm24158-201ENSMUST00000175263 71 ntBASIC13.44□□□□□ -0.26
Fv4P11370 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.44□□□□□ -0.26
Fv4P11370 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.44□□□□□ -0.26
Fv4P11370 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.44□□□□□ -0.26
Fv4P11370 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.44□□□□□ -0.26
Fv4P11370 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.44□□□□□ -0.26
Fv4P11370 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Fv4P11370 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fv4P11370 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms