Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.58□□□□□ -0.72
Fn1P11276 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Fn1P11276 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Fn1P11276 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Fn1P11276 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Fn1P11276 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Fn1P11276 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Fn1P11276 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Fn1P11276 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Fn1P11276 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Fn1P11276 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Fn1P11276 Gm19459-201ENSMUST00000176240 835 ntBASIC10.58□□□□□ -0.72
Fn1P11276 Gm5070-201ENSMUST00000177599 862 ntBASIC10.58□□□□□ -0.72
Fn1P11276 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.58□□□□□ -0.72
Fn1P11276 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Fn1P11276 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.58□□□□□ -0.72
Fn1P11276 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.58□□□□□ -0.72
Fn1P11276 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Fn1P11276 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Fn1P11276 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Fn1P11276 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Fn1P11276 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Fn1P11276 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Fn1P11276 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.57□□□□□ -0.72
Fn1P11276 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.57□□□□□ -0.72
Fn1P11276 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.57□□□□□ -0.72
Fn1P11276 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.57□□□□□ -0.72
Fn1P11276 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Fn1P11276 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Fn1P11276 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Fn1P11276 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Fn1P11276 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC10.57□□□□□ -0.72
Fn1P11276 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.57□□□□□ -0.72
Fn1P11276 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
Fn1P11276 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Fn1P11276 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Fn1P11276 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.57□□□□□ -0.72
Fn1P11276 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Fn1P11276 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.57□□□□□ -0.72
Fn1P11276 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Fn1P11276 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.57□□□□□ -0.72
Fn1P11276 Gm37042-201ENSMUST00000193816 581 ntBASIC10.57□□□□□ -0.72
Fn1P11276 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.57□□□□□ -0.72
Fn1P11276 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.57□□□□□ -0.72
Fn1P11276 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.57□□□□□ -0.72
Fn1P11276 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fn1P11276 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Fn1P11276 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fn1P11276 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fn1P11276 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Fn1P11276 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fn1P11276 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Fn1P11276 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fn1P11276 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Fn1P11276 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fn1P11276 Gm44999-201ENSMUST00000207456 1493 ntBASIC10.56□□□□□ -0.72
Fn1P11276 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC10.56□□□□□ -0.72
Fn1P11276 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fn1P11276 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.56□□□□□ -0.72
Fn1P11276 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Fn1P11276 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fn1P11276 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fn1P11276 Gm10434-201ENSMUST00000101158 471 ntBASIC10.56□□□□□ -0.72
Fn1P11276 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Fn1P11276 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fn1P11276 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fn1P11276 Gm38144-201ENSMUST00000192790 465 ntBASIC10.56□□□□□ -0.72
Fn1P11276 Gm31256-201ENSMUST00000194705 506 ntBASIC10.56□□□□□ -0.72
Fn1P11276 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.56□□□□□ -0.72
Fn1P11276 Gm42779-201ENSMUST00000198807 406 ntBASIC10.56□□□□□ -0.72
Fn1P11276 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.56□□□□□ -0.72
Fn1P11276 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms