Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vti1aO89116 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15□□□□□ -0.01
Vti1aO89116 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15□□□□□ -0.01
Vti1aO89116 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 AC153872.1-201ENSMUST00000199539 128 ntBASIC15□□□□□ -0.01
Vti1aO89116 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vti1aO89116 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15□□□□□ -0.01
Vti1aO89116 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15□□□□□ -0.01
Vti1aO89116 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1aO89116 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1aO89116 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1aO89116 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1aO89116 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vti1aO89116 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1aO89116 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1aO89116 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1aO89116 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vti1aO89116 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Vti1aO89116 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1aO89116 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.99□□□□□ -0.01
Vti1aO89116 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.99□□□□□ -0.01
Vti1aO89116 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.99□□□□□ -0.01
Vti1aO89116 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Vti1aO89116 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Vti1aO89116 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1aO89116 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1aO89116 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1aO89116 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vti1aO89116 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1aO89116 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vti1aO89116 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Vti1aO89116 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vti1aO89116 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.98□□□□□ -0.01
Vti1aO89116 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.98□□□□□ -0.01
Vti1aO89116 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.98□□□□□ -0.01
Vti1aO89116 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.98□□□□□ -0.01
Vti1aO89116 Gm15806-201ENSMUST00000120696 955 ntBASIC14.98□□□□□ -0.01
Vti1aO89116 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Gm18062-201ENSMUST00000208020 547 ntBASIC14.98□□□□□ -0.01
Vti1aO89116 Gm18055-201ENSMUST00000208254 547 ntBASIC14.98□□□□□ -0.01
Vti1aO89116 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vti1aO89116 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vti1aO89116 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vti1aO89116 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1aO89116 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms