Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col5a1O88207 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Col5a1O88207 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.36□□□□□ -0.43
Col5a1O88207 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Gm6023-201ENSMUST00000118217 606 ntBASIC12.36□□□□□ -0.43
Col5a1O88207 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.36□□□□□ -0.43
Col5a1O88207 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.36□□□□□ -0.43
Col5a1O88207 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.36□□□□□ -0.43
Col5a1O88207 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.36□□□□□ -0.43
Col5a1O88207 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.36□□□□□ -0.43
Col5a1O88207 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.36□□□□□ -0.43
Col5a1O88207 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col5a1O88207 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col5a1O88207 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col5a1O88207 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Col5a1O88207 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col5a1O88207 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.35□□□□□ -0.43
Col5a1O88207 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col5a1O88207 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col5a1O88207 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Gm11618-201ENSMUST00000117946 267 ntBASIC12.35□□□□□ -0.43
Col5a1O88207 Gm14381-201ENSMUST00000122105 414 ntBASIC12.35□□□□□ -0.43
Col5a1O88207 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.35□□□□□ -0.43
Col5a1O88207 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 B9d1os-201ENSMUST00000137010 674 ntBASIC12.35□□□□□ -0.43
Col5a1O88207 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.35□□□□□ -0.43
Col5a1O88207 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Col5a1O88207 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.35□□□□□ -0.43
Col5a1O88207 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col5a1O88207 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.35□□□□□ -0.43
Col5a1O88207 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.35□□□□□ -0.43
Col5a1O88207 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.35□□□□□ -0.43
Col5a1O88207 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Col5a1O88207 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col5a1O88207 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Col5a1O88207 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.34□□□□□ -0.43
Col5a1O88207 AU022133-201ENSMUST00000200601 873 ntBASIC12.34□□□□□ -0.43
Col5a1O88207 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.34□□□□□ -0.43
Col5a1O88207 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col5a1O88207 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col5a1O88207 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col5a1O88207 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms