Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.47□□□□□ -0.09
Ttc3O88196 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.47□□□□□ -0.09
Ttc3O88196 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ttc3O88196 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.46□□□□□ -0.09
Ttc3O88196 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
Ttc3O88196 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Gm22018-201ENSMUST00000104357 131 ntBASIC14.46□□□□□ -0.09
Ttc3O88196 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Gm12742-201ENSMUST00000117326 410 ntBASIC14.46□□□□□ -0.09
Ttc3O88196 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.46□□□□□ -0.09
Ttc3O88196 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.46□□□□□ -0.09
Ttc3O88196 Gm7561-201ENSMUST00000211203 886 ntBASIC14.46□□□□□ -0.09
Ttc3O88196 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Gm24447-201ENSMUST00000083977 338 ntBASIC14.46□□□□□ -0.09
Ttc3O88196 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc3O88196 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ttc3O88196 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ttc3O88196 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ttc3O88196 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.46□□□□□ -0.1
Ttc3O88196 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ttc3O88196 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc3O88196 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc3O88196 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.45□□□□□ -0.1
Ttc3O88196 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc3O88196 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
Ttc3O88196 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc3O88196 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc3O88196 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Ttc3O88196 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.45□□□□□ -0.1
Ttc3O88196 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc3O88196 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc3O88196 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc3O88196 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.45□□□□□ -0.1
Ttc3O88196 Gm27847-201ENSMUST00000183711 107 ntBASIC14.45□□□□□ -0.1
Ttc3O88196 Gm27375-201ENSMUST00000183799 107 ntBASIC14.45□□□□□ -0.1
Ttc3O88196 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.45□□□□□ -0.1
Ttc3O88196 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.45□□□□□ -0.1
Ttc3O88196 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc3O88196 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.45□□□□□ -0.1
Ttc3O88196 Gm17330-201ENSMUST00000221047 165 ntBASIC14.45□□□□□ -0.1
Ttc3O88196 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ttc3O88196 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc3O88196 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.45□□□□□ -0.1
Ttc3O88196 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.45□□□□□ -0.1
Ttc3O88196 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.45□□□□□ -0.1
Ttc3O88196 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc3O88196 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.45□□□□□ -0.1
Ttc3O88196 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 Gm14350-201ENSMUST00000116642 640 ntBASIC14.44□□□□□ -0.1
Ttc3O88196 Gm12203-201ENSMUST00000118235 598 ntBASIC14.44□□□□□ -0.1
Ttc3O88196 Gm12209-201ENSMUST00000120089 596 ntBASIC14.44□□□□□ -0.1
Ttc3O88196 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.44□□□□□ -0.1
Ttc3O88196 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 Gm44397-201ENSMUST00000195950 113 ntBASIC14.44□□□□□ -0.1
Ttc3O88196 Gm42550-201ENSMUST00000201553 960 ntBASIC14.44□□□□□ -0.1
Ttc3O88196 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.44□□□□□ -0.1
Ttc3O88196 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.44□□□□□ -0.1
Ttc3O88196 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ttc3O88196 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.44□□□□□ -0.1
Ttc3O88196 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc3O88196 Gm15371-201ENSMUST00000117057 784 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms