Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vamp8O70404 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Vamp8O70404 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vamp8O70404 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vamp8O70404 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vamp8O70404 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Vamp8O70404 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.73□□□□□ -0.85
Vamp8O70404 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Vamp8O70404 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Vamp8O70404 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Vamp8O70404 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Zfp125-201ENSMUST00000079237 2488 ntBASIC9.73□□□□□ -0.85
Vamp8O70404 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC9.73□□□□□ -0.85
Vamp8O70404 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Gm44891-201ENSMUST00000208817 2223 ntBASIC9.73□□□□□ -0.85
Vamp8O70404 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC9.73□□□□□ -0.85
Vamp8O70404 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC9.73□□□□□ -0.85
Vamp8O70404 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC9.73□□□□□ -0.85
Vamp8O70404 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC9.73□□□□□ -0.85
Vamp8O70404 AC135963.1-201ENSMUST00000211640 717 ntBASIC9.73□□□□□ -0.85
Vamp8O70404 AC131690.1-201ENSMUST00000218406 374 ntBASIC9.73□□□□□ -0.85
Vamp8O70404 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Vamp8O70404 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Vamp8O70404 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Vamp8O70404 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Vamp8O70404 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Vamp8O70404 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Gm6159-201ENSMUST00000191249 1724 ntBASIC9.73□□□□□ -0.85
Vamp8O70404 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vamp8O70404 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Gm13730-201ENSMUST00000121036 1462 ntBASIC9.72□□□□□ -0.85
Vamp8O70404 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Vamp8O70404 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC9.72□□□□□ -0.85
Vamp8O70404 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Vamp8O70404 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC9.72□□□□□ -0.85
Vamp8O70404 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Vamp8O70404 Gm8749-201ENSMUST00000117737 331 ntBASIC9.72□□□□□ -0.85
Vamp8O70404 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Gm37722-201ENSMUST00000193757 208 ntBASIC9.72□□□□□ -0.85
Vamp8O70404 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.72□□□□□ -0.85
Vamp8O70404 AC102291.3-201ENSMUST00000226566 405 ntBASIC9.72□□□□□ -0.85
Vamp8O70404 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vamp8O70404 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms