Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.96□□□□□ -0.01
Nr1i3O35627 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Nr1i3O35627 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Nr1i3O35627 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.96□□□□□ -0.01
Nr1i3O35627 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nr1i3O35627 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Nr1i3O35627 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Nr1i3O35627 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.95□□□□□ -0.02
Nr1i3O35627 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Nr1i3O35627 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.95□□□□□ -0.02
Nr1i3O35627 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Nr1i3O35627 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Gm24543-201ENSMUST00000103867 82 ntBASIC14.95□□□□□ -0.02
Nr1i3O35627 Gm15693-201ENSMUST00000120470 637 ntBASIC14.95□□□□□ -0.02
Nr1i3O35627 Gm33320-201ENSMUST00000192232 530 ntBASIC14.95□□□□□ -0.02
Nr1i3O35627 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.95□□□□□ -0.02
Nr1i3O35627 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nr1i3O35627 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nr1i3O35627 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1i3O35627 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Nr1i3O35627 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.94□□□□□ -0.02
Nr1i3O35627 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nr1i3O35627 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nr1i3O35627 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Gm15653-201ENSMUST00000119247 907 ntBASIC14.94□□□□□ -0.02
Nr1i3O35627 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.94□□□□□ -0.02
Nr1i3O35627 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Nr1i3O35627 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.94□□□□□ -0.02
Nr1i3O35627 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.94□□□□□ -0.02
Nr1i3O35627 Gm10253-201ENSMUST00000194270 940 ntBASIC14.94□□□□□ -0.02
Nr1i3O35627 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.94□□□□□ -0.02
Nr1i3O35627 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.94□□□□□ -0.02
Nr1i3O35627 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.94□□□□□ -0.02
Nr1i3O35627 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Nr1i3O35627 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Nr1i3O35627 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nr1i3O35627 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Nr1i3O35627 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
Nr1i3O35627 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Nr1i3O35627 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Nr1i3O35627 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1i3O35627 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nr1i3O35627 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms