Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC17.1■□□□□ 0.33
Dctn1O08788 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.1■□□□□ 0.33
Dctn1O08788 Gm29741-201ENSMUST00000192667 421 ntBASIC17.1■□□□□ 0.33
Dctn1O08788 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.1■□□□□ 0.33
Dctn1O08788 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.1■□□□□ 0.33
Dctn1O08788 Gm40466-201ENSMUST00000212174 422 ntBASIC17.1■□□□□ 0.33
Dctn1O08788 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dctn1O08788 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dctn1O08788 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Dctn1O08788 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dctn1O08788 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dctn1O08788 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dctn1O08788 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dctn1O08788 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dctn1O08788 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dctn1O08788 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.09■□□□□ 0.33
Dctn1O08788 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Dctn1O08788 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Dctn1O08788 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.09■□□□□ 0.33
Dctn1O08788 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 Mir698-201ENSMUST00000102164 109 ntBASIC17.09■□□□□ 0.33
Dctn1O08788 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Dctn1O08788 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 Gm24644-201ENSMUST00000157114 139 ntBASIC17.09■□□□□ 0.33
Dctn1O08788 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.09■□□□□ 0.33
Dctn1O08788 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC17.09■□□□□ 0.33
Dctn1O08788 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.09■□□□□ 0.33
Dctn1O08788 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Dctn1O08788 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.09■□□□□ 0.33
Dctn1O08788 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.09■□□□□ 0.33
Dctn1O08788 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dctn1O08788 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dctn1O08788 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dctn1O08788 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.08■□□□□ 0.33
Dctn1O08788 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.08■□□□□ 0.33
Dctn1O08788 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Dctn1O08788 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dctn1O08788 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.08■□□□□ 0.33
Dctn1O08788 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Dctn1O08788 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dctn1O08788 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.08■□□□□ 0.32
Dctn1O08788 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dctn1O08788 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.08■□□□□ 0.32
Dctn1O08788 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC17.08■□□□□ 0.32
Dctn1O08788 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.08■□□□□ 0.32
Dctn1O08788 Gm11803-201ENSMUST00000119966 444 ntBASIC17.08■□□□□ 0.32
Dctn1O08788 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC17.08■□□□□ 0.32
Dctn1O08788 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.08■□□□□ 0.32
Dctn1O08788 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.08■□□□□ 0.32
Dctn1O08788 Gm22331-201ENSMUST00000158066 136 ntBASIC17.08■□□□□ 0.32
Dctn1O08788 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.08■□□□□ 0.32
Dctn1O08788 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.08■□□□□ 0.32
Dctn1O08788 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.08■□□□□ 0.32
Dctn1O08788 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.08■□□□□ 0.32
Dctn1O08788 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.08■□□□□ 0.32
Dctn1O08788 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.08■□□□□ 0.32
Dctn1O08788 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dctn1O08788 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Dctn1O08788 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Dctn1O08788 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.08■□□□□ 0.32
Dctn1O08788 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dctn1O08788 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dctn1O08788 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dctn1O08788 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dctn1O08788 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dctn1O08788 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Dctn1O08788 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dctn1O08788 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dctn1O08788 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dctn1O08788 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Dctn1O08788 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Dctn1O08788 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Dctn1O08788 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Dctn1O08788 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.07■□□□□ 0.32
Dctn1O08788 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Dctn1O08788 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.07■□□□□ 0.32
Dctn1O08788 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.07■□□□□ 0.32
Dctn1O08788 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.07■□□□□ 0.32
Dctn1O08788 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.07■□□□□ 0.32
Dctn1O08788 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.07■□□□□ 0.32
Dctn1O08788 Gm8598-201ENSMUST00000221184 836 ntBASIC17.07■□□□□ 0.32
Dctn1O08788 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dctn1O08788 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dctn1O08788 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dctn1O08788 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Dctn1O08788 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.07■□□□□ 0.32
Dctn1O08788 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms