Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh1F7BJK1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh1F7BJK1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh1F7BJK1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh1F7BJK1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh1F7BJK1 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh1F7BJK1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh1F7BJK1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Gm12260-201ENSMUST00000122447 411 ntBASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Gm6443-201ENSMUST00000203599 874 ntBASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Gm20553-201ENSMUST00000204205 844 ntBASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh1F7BJK1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh1F7BJK1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms