Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm22175-201ENSMUST00000175007 78 ntBASIC14.31□□□□□ -0.12
Atf6F6VAN0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Atf6F6VAN0 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6F6VAN0 Gm27533-201ENSMUST00000183800 152 ntBASIC14.31□□□□□ -0.12
Atf6F6VAN0 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.31□□□□□ -0.12
Atf6F6VAN0 Shd-206ENSMUST00000225145 998 ntBASIC14.31□□□□□ -0.12
Atf6F6VAN0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.31□□□□□ -0.12
Atf6F6VAN0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6F6VAN0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Atf6F6VAN0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6F6VAN0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6F6VAN0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6F6VAN0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6F6VAN0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6F6VAN0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6F6VAN0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Atf6F6VAN0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6F6VAN0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6F6VAN0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6F6VAN0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6F6VAN0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Gm27430-201ENSMUST00000184585 107 ntBASIC14.3□□□□□ -0.12
Atf6F6VAN0 Gm38294-201ENSMUST00000192831 381 ntBASIC14.3□□□□□ -0.12
Atf6F6VAN0 Gm44333-201ENSMUST00000197168 107 ntBASIC14.3□□□□□ -0.12
Atf6F6VAN0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atf6F6VAN0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Atf6F6VAN0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.29□□□□□ -0.12
Atf6F6VAN0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Gm25144-201ENSMUST00000179561 110 ntBASIC14.29□□□□□ -0.12
Atf6F6VAN0 Gm25352-201ENSMUST00000179815 110 ntBASIC14.29□□□□□ -0.12
Atf6F6VAN0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.29□□□□□ -0.12
Atf6F6VAN0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.29□□□□□ -0.12
Atf6F6VAN0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf6F6VAN0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.28□□□□□ -0.12
Atf6F6VAN0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.28□□□□□ -0.12
Atf6F6VAN0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.28□□□□□ -0.12
Atf6F6VAN0 Gm13616-201ENSMUST00000120600 222 ntBASIC14.28□□□□□ -0.12
Atf6F6VAN0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms