Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Gm12341-201ENSMUST00000119724 503 ntBASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Gm14928-201ENSMUST00000120198 477 ntBASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Gm43094-201ENSMUST00000196549 921 ntBASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Gm19078-201ENSMUST00000206311 727 ntBASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 AC155258.1-201ENSMUST00000219303 253 ntBASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Gm18018-201ENSMUST00000198273 408 ntBASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 AC238811.3-201ENSMUST00000225422 709 ntBASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmf1B9EKI3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC18.79■□□□□ 0.6
Tmf1B9EKI3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmf1B9EKI3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
Tmf1B9EKI3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmf1B9EKI3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmf1B9EKI3 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.78■□□□□ 0.6
Tmf1B9EKI3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmf1B9EKI3 Gm6180-201ENSMUST00000065243 498 ntBASIC18.78■□□□□ 0.6
Tmf1B9EKI3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmf1B9EKI3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Tmf1B9EKI3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Tmf1B9EKI3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmf1B9EKI3 Gm28182-201ENSMUST00000188354 2477 ntBASIC18.78■□□□□ 0.6
Tmf1B9EKI3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmf1B9EKI3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
Tmf1B9EKI3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tmf1B9EKI3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmf1B9EKI3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmf1B9EKI3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Gm11524-201ENSMUST00000119349 807 ntBASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Gm15376-201ENSMUST00000122258 783 ntBASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Mir6392-201ENSMUST00000184924 108 ntBASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Gm8515-201ENSMUST00000194852 576 ntBASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Gm18934-201ENSMUST00000216671 1044 ntBASIC18.77■□□□□ 0.6
Tmf1B9EKI3 AC155286.1-201ENSMUST00000218632 448 ntBASIC18.77■□□□□ 0.6
Tmf1B9EKI3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmf1B9EKI3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tmf1B9EKI3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Tmf1B9EKI3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tmf1B9EKI3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tmf1B9EKI3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmf1B9EKI3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tmf1B9EKI3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmf1B9EKI3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmf1B9EKI3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmf1B9EKI3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmf1B9EKI3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.76■□□□□ 0.59
Tmf1B9EKI3 Gm26464-201ENSMUST00000157094 305 ntBASIC18.76■□□□□ 0.59
Tmf1B9EKI3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.76■□□□□ 0.59
Tmf1B9EKI3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms