Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Gm12209-201ENSMUST00000120089 596 ntBASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Gm27516-201ENSMUST00000184237 98 ntBASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Gm19184-201ENSMUST00000196798 928 ntBASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Gm6013-201ENSMUST00000212264 699 ntBASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.5□□□□□ -0.25
Col9a3A2ACT7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Gm14723-201ENSMUST00000118686 215 ntBASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Gm1335-201ENSMUST00000121653 386 ntBASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a3A2ACT7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Gm27682-201ENSMUST00000183930 110 ntBASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Gm24526-201ENSMUST00000082921 158 ntBASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.48□□□□□ -0.25
Col9a3A2ACT7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms