Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm9449-201ENSMUST00000207265 1011 ntBASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 AC164629.2-201ENSMUST00000217916 270 ntBASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Grk6-205ENSMUST00000224653 2976 ntBASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Gm27920-201ENSMUST00000183953 96 ntBASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13d-4A0A0G2JFX3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13d-4A0A0G2JFX3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms