Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Gm15467-201ENSMUST00000120582 445 ntBASIC10.7□□□□□ -0.7
PdfS4R2K0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC10.7□□□□□ -0.7
PdfS4R2K0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.7□□□□□ -0.7
PdfS4R2K0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Gm9727-201ENSMUST00000161387 555 ntBASIC10.7□□□□□ -0.7
PdfS4R2K0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
PdfS4R2K0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC10.7□□□□□ -0.7
PdfS4R2K0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
PdfS4R2K0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Mir8117-201ENSMUST00000184773 107 ntBASIC10.7□□□□□ -0.7
PdfS4R2K0 Gm2213-201ENSMUST00000197485 688 ntBASIC10.7□□□□□ -0.7
PdfS4R2K0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC10.7□□□□□ -0.7
PdfS4R2K0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC10.7□□□□□ -0.7
PdfS4R2K0 AC154222.1-201ENSMUST00000223882 475 ntBASIC10.7□□□□□ -0.7
PdfS4R2K0 AC159106.1-201ENSMUST00000224421 690 ntBASIC10.7□□□□□ -0.7
PdfS4R2K0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC10.7□□□□□ -0.7
PdfS4R2K0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.7□□□□□ -0.7
PdfS4R2K0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
PdfS4R2K0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.7□□□□□ -0.7
PdfS4R2K0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
PdfS4R2K0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
PdfS4R2K0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.69□□□□□ -0.7
PdfS4R2K0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC10.69□□□□□ -0.7
PdfS4R2K0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
PdfS4R2K0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Gm27628-201ENSMUST00000184911 107 ntBASIC10.69□□□□□ -0.7
PdfS4R2K0 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.69□□□□□ -0.7
PdfS4R2K0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.69□□□□□ -0.7
PdfS4R2K0 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.69□□□□□ -0.7
PdfS4R2K0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
PdfS4R2K0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.69□□□□□ -0.7
PdfS4R2K0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
PdfS4R2K0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
PdfS4R2K0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
PdfS4R2K0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
PdfS4R2K0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms