Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Gm18558-201ENSMUST00000186253 1214 ntBASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Gm16476-201ENSMUST00000221544 139 ntBASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Dupd1-202ENSMUST00000224735 548 ntBASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.36■□□□□ 0.05
Prpf40aQ9R1C7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Gm15653-201ENSMUST00000119247 907 ntBASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Mir6956-201ENSMUST00000183598 62 ntBASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Gm44608-201ENSMUST00000206827 855 ntBASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Mir125a-201ENSMUST00000083545 68 ntBASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Prpf40aQ9R1C7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Gm27533-201ENSMUST00000183800 152 ntBASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Prpf40aQ9R1C7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms