Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.25■□□□□ 0.19
Scn11aQ9R053 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn11aQ9R053 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.25■□□□□ 0.19
Scn11aQ9R053 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Scn11aQ9R053 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Scn11aQ9R053 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn11aQ9R053 Gm16202-201ENSMUST00000117532 544 ntBASIC16.25■□□□□ 0.19
Scn11aQ9R053 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Scn11aQ9R053 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn11aQ9R053 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.25■□□□□ 0.19
Scn11aQ9R053 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Scn11aQ9R053 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn11aQ9R053 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.25■□□□□ 0.19
Scn11aQ9R053 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn11aQ9R053 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.25■□□□□ 0.19
Scn11aQ9R053 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Scn11aQ9R053 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn11aQ9R053 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn11aQ9R053 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.24■□□□□ 0.19
Scn11aQ9R053 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn11aQ9R053 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.24■□□□□ 0.19
Scn11aQ9R053 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Mir5132-201ENSMUST00000175166 71 ntBASIC16.23■□□□□ 0.19
Scn11aQ9R053 Gm26927-201ENSMUST00000182385 965 ntBASIC16.23■□□□□ 0.19
Scn11aQ9R053 Gm38144-201ENSMUST00000192790 465 ntBASIC16.23■□□□□ 0.19
Scn11aQ9R053 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.23■□□□□ 0.19
Scn11aQ9R053 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Gm6447-201ENSMUST00000118905 835 ntBASIC16.23■□□□□ 0.19
Scn11aQ9R053 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Gm37497-201ENSMUST00000195830 798 ntBASIC16.23■□□□□ 0.19
Scn11aQ9R053 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Gm10146-201ENSMUST00000072739 309 ntBASIC16.23■□□□□ 0.19
Scn11aQ9R053 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Scn11aQ9R053 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn11aQ9R053 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Scn11aQ9R053 AC093022.1-201ENSMUST00000226949 1072 ntBASIC16.22■□□□□ 0.19
Scn11aQ9R053 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.22■□□□□ 0.19
Scn11aQ9R053 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms