Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Gm14042-201ENSMUST00000120139 833 ntBASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Gm5866-201ENSMUST00000177881 973 ntBASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Gm3436-201ENSMUST00000179930 840 ntBASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clcf1Q9QZM3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Syt7-204ENSMUST00000223586 1344 ntBASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Gm9229-201ENSMUST00000222777 126 ntBASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clcf1Q9QZM3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Gm4875-201ENSMUST00000118257 786 ntBASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms