Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Smco4Q9JIS3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Smco4Q9JIS3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Smco4Q9JIS3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Smco4Q9JIS3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Smco4Q9JIS3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Gm715-201ENSMUST00000117865 831 ntBASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Gm25406-201ENSMUST00000157599 105 ntBASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Smco4Q9JIS3 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Gm8318-201ENSMUST00000182954 872 ntBASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Gm21814-202ENSMUST00000203277 873 ntBASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.13□□□□□ -0.63
Smco4Q9JIS3 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.13□□□□□ -0.63
Smco4Q9JIS3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco4Q9JIS3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms