Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Gm9200-201ENSMUST00000118513 1354 ntBASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Gm8835-201ENSMUST00000173096 1169 ntBASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Gm27486-201ENSMUST00000184923 80 ntBASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cpsf1Q9EPU4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpsf1Q9EPU4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpsf1Q9EPU4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpsf1Q9EPU4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpsf1Q9EPU4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Cpsf1Q9EPU4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Gm45784-201ENSMUST00000188360 142 ntBASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Gm10040-201ENSMUST00000080726 1662 ntBASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Gm9816-201ENSMUST00000122292 1414 ntBASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf1Q9EPU4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Gm6091-201ENSMUST00000098307 165 ntBASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Gm13050-201ENSMUST00000122149 1345 ntBASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Gm12626-201ENSMUST00000117339 1983 ntBASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Gm12623-201ENSMUST00000119849 1983 ntBASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Gm10156-201ENSMUST00000122364 462 ntBASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Gm42442-201ENSMUST00000197951 1133 ntBASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf1Q9EPU4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 Gm23931-201ENSMUST00000103842 109 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms