Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Gm27494-201ENSMUST00000184735 189 ntBASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Gm44335-201ENSMUST00000196879 141 ntBASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Gm44297-201ENSMUST00000198304 141 ntBASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Gm44346-201ENSMUST00000198851 141 ntBASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Gm43514-201ENSMUST00000198852 424 ntBASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4cQ9D7F7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm43364-201ENSMUST00000196046 3274 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm29310-201ENSMUST00000185468 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm21825-201ENSMUST00000185728 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm29109-201ENSMUST00000185895 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm21896-201ENSMUST00000186520 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm21873-201ENSMUST00000186728 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm21794-201ENSMUST00000187056 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm21880-201ENSMUST00000187275 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm21826-201ENSMUST00000187451 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm21198-201ENSMUST00000188393 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm21749-201ENSMUST00000189343 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm21901-201ENSMUST00000189568 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm29424-201ENSMUST00000189716 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm28599-201ENSMUST00000189838 694 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm21867-201ENSMUST00000189917 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm29269-201ENSMUST00000190087 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm21722-201ENSMUST00000190153 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm28423-201ENSMUST00000190701 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm21899-201ENSMUST00000190745 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm21910-201ENSMUST00000191163 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm21849-201ENSMUST00000191571 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm28678-201ENSMUST00000191593 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm20910-201ENSMUST00000193268 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm21871-201ENSMUST00000194621 696 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.66■□□□□ 0.26
Chmp4cQ9D7F7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms