Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.19□□□□□ -0.3
Upk1aQ9D132 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.19□□□□□ -0.3
Upk1aQ9D132 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.19□□□□□ -0.3
Upk1aQ9D132 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.19□□□□□ -0.3
Upk1aQ9D132 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.19□□□□□ -0.3
Upk1aQ9D132 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.19□□□□□ -0.3
Upk1aQ9D132 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.18□□□□□ -0.3
Upk1aQ9D132 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.18□□□□□ -0.3
Upk1aQ9D132 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.18□□□□□ -0.3
Upk1aQ9D132 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1aQ9D132 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.17□□□□□ -0.3
Upk1aQ9D132 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk1aQ9D132 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms