Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hdhd3Q9CYW4 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Hdhd3Q9CYW4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hdhd3Q9CYW4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hdhd3Q9CYW4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hdhd3Q9CYW4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hdhd3Q9CYW4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hdhd3Q9CYW4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hdhd3Q9CYW4 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Hdhd3Q9CYW4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hdhd3Q9CYW4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hdhd3Q9CYW4 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hdhd3Q9CYW4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Gm16198-201ENSMUST00000118766 670 ntBASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Ank2-226ENSMUST00000189368 339 ntBASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hdhd3Q9CYW4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Rps4l-201ENSMUST00000071745 943 ntBASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms