Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt88Q9CPR6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Gm16198-201ENSMUST00000118766 670 ntBASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Gm7862-201ENSMUST00000121461 292 ntBASIC12.56□□□□□ -0.4
Krt88Q9CPR6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt88Q9CPR6 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Gm13036-201ENSMUST00000117799 748 ntBASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Gm12882-201ENSMUST00000121696 517 ntBASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms