Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Gm2213-201ENSMUST00000197485 688 ntBASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Gm20553-201ENSMUST00000204205 844 ntBASIC13.66□□□□□ -0.22
Trim8Q99PJ2 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim8Q99PJ2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim8Q99PJ2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim8Q99PJ2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Gm6973-201ENSMUST00000117080 721 ntBASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Gm14494-201ENSMUST00000118786 435 ntBASIC13.64□□□□□ -0.23
Trim8Q99PJ2 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms