Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Gm9540-201ENSMUST00000188230 478 ntBASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gm12616-201ENSMUST00000118594 382 ntBASIC13.88□□□□□ -0.19
Cdh23Q99PF4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gm12624-201ENSMUST00000177615 382 ntBASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gm12621-201ENSMUST00000177760 382 ntBASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gm12615-201ENSMUST00000177970 382 ntBASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gm12622-201ENSMUST00000177975 382 ntBASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gm12627-201ENSMUST00000178412 382 ntBASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gm12625-201ENSMUST00000179122 382 ntBASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gm12614-201ENSMUST00000179586 382 ntBASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gm12613-201ENSMUST00000180323 382 ntBASIC13.88□□□□□ -0.19
Cdh23Q99PF4 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gm45219-201ENSMUST00000205602 465 ntBASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Gm8385-201ENSMUST00000058999 643 ntBASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh23Q99PF4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Gm13097-201ENSMUST00000210722 397 ntBASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh23Q99PF4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms