Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Gm24543-201ENSMUST00000103867 82 ntBASIC18.04■□□□□ 0.48
Rtn4Q99P72 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Gm13464-201ENSMUST00000119418 935 ntBASIC18.04■□□□□ 0.48
Rtn4Q99P72 Gm13487-201ENSMUST00000122240 864 ntBASIC18.04■□□□□ 0.48
Rtn4Q99P72 Mir1897-201ENSMUST00000122581 272 ntBASIC18.04■□□□□ 0.48
Rtn4Q99P72 Gm25144-201ENSMUST00000179561 110 ntBASIC18.04■□□□□ 0.48
Rtn4Q99P72 Gm25352-201ENSMUST00000179815 110 ntBASIC18.04■□□□□ 0.48
Rtn4Q99P72 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Gm28438-201ENSMUST00000188299 345 ntBASIC18.04■□□□□ 0.48
Rtn4Q99P72 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Gm37751-201ENSMUST00000192440 1198 ntBASIC18.04■□□□□ 0.48
Rtn4Q99P72 AC153968.2-201ENSMUST00000215579 1140 ntBASIC18.04■□□□□ 0.48
Rtn4Q99P72 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 AC164107.1-201ENSMUST00000227730 2161 ntBASIC18.04■□□□□ 0.48
Rtn4Q99P72 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn4Q99P72 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 BC037039-201ENSMUST00000192003 2205 ntBASIC18.03■□□□□ 0.48
Rtn4Q99P72 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Gm14767-201ENSMUST00000121559 586 ntBASIC18.03■□□□□ 0.48
Rtn4Q99P72 Gm27533-201ENSMUST00000183800 152 ntBASIC18.03■□□□□ 0.48
Rtn4Q99P72 Gm28455-201ENSMUST00000189105 1290 ntBASIC18.03■□□□□ 0.48
Rtn4Q99P72 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Gm5186-201ENSMUST00000218781 920 ntBASIC18.03■□□□□ 0.48
Rtn4Q99P72 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 AC115784.1-201ENSMUST00000227687 1010 ntBASIC18.03■□□□□ 0.48
Rtn4Q99P72 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn4Q99P72 Matn2-206ENSMUST00000228570 2798 ntBASIC18.02■□□□□ 0.48
Rtn4Q99P72 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Gm9719-201ENSMUST00000162765 543 ntBASIC18.02■□□□□ 0.48
Rtn4Q99P72 Gm20659-201ENSMUST00000176599 604 ntTSL 3 BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Rtn4Q99P72 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rtn4Q99P72 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rtn4Q99P72 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms