Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Gm20553-201ENSMUST00000204205 844 ntBASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd1Q99MH6 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Gm38225-201ENSMUST00000194001 393 ntBASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkd1Q99MH6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Gm18057-201ENSMUST00000208220 503 ntBASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms