Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.63□□□□□ -0.07
Clp1Q99LI9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Gm38266-201ENSMUST00000194931 421 ntBASIC14.62□□□□□ -0.07
Clp1Q99LI9 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.62□□□□□ -0.07
Clp1Q99LI9 Gm43822-201ENSMUST00000200285 476 ntBASIC14.62□□□□□ -0.07
Clp1Q99LI9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.62□□□□□ -0.07
Clp1Q99LI9 Gm45930-201ENSMUST00000221330 292 ntBASIC14.62□□□□□ -0.07
Clp1Q99LI9 Snora73a-201ENSMUST00000082453 205 ntBASIC14.62□□□□□ -0.07
Clp1Q99LI9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Clp1Q99LI9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clp1Q99LI9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Gm38241-201ENSMUST00000192641 898 ntBASIC14.61□□□□□ -0.07
Clp1Q99LI9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Efs-202ENSMUST00000227037 2540 ntBASIC14.61□□□□□ -0.07
Clp1Q99LI9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Clp1Q99LI9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.6□□□□□ -0.07
Clp1Q99LI9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.6□□□□□ -0.07
Clp1Q99LI9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Gm37008-201ENSMUST00000195712 319 ntBASIC14.6□□□□□ -0.07
Clp1Q99LI9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms