Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.01■□□□□ 0.15
Rfc4Q99J62 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Gm14451-201ENSMUST00000121581 1542 ntBASIC16■□□□□ 0.15
Rfc4Q99J62 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC16■□□□□ 0.15
Rfc4Q99J62 Gm24644-201ENSMUST00000157114 139 ntBASIC16■□□□□ 0.15
Rfc4Q99J62 Gm27572-201ENSMUST00000183702 255 ntBASIC16■□□□□ 0.15
Rfc4Q99J62 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 AC166997.1-201ENSMUST00000225122 572 ntBASIC16■□□□□ 0.15
Rfc4Q99J62 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rfc4Q99J62 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16■□□□□ 0.15
Rfc4Q99J62 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16■□□□□ 0.15
Rfc4Q99J62 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rfc4Q99J62 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.99■□□□□ 0.15
Rfc4Q99J62 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.99■□□□□ 0.15
Rfc4Q99J62 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.99■□□□□ 0.15
Rfc4Q99J62 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Gm43179-201ENSMUST00000198797 275 ntBASIC15.99■□□□□ 0.15
Rfc4Q99J62 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.99■□□□□ 0.15
Rfc4Q99J62 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rfc4Q99J62 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.98■□□□□ 0.15
Rfc4Q99J62 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Gm5370-201ENSMUST00000187187 574 ntBASIC15.98■□□□□ 0.15
Rfc4Q99J62 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Rfc4Q99J62 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Gm43818-201ENSMUST00000200605 466 ntBASIC15.98■□□□□ 0.15
Rfc4Q99J62 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rfc4Q99J62 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rfc4Q99J62 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfc4Q99J62 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Rfc4Q99J62 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfc4Q99J62 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfc4Q99J62 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms