Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pcdha2Q91Y17 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha2Q91Y17 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha2Q91Y17 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdha2Q91Y17 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha2Q91Y17 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha2Q91Y17 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Gm28631-201ENSMUST00000190740 334 ntBASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdha2Q91Y17 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Gm5354-201ENSMUST00000182417 973 ntBASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Gm27772-201ENSMUST00000184900 187 ntBASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Gm43094-201ENSMUST00000196549 921 ntBASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha2Q91Y17 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms