Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm27306-201ENSMUST00000183970 107 ntBASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 Gm44719-201ENSMUST00000206404 149 ntBASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhb6Q91XZ4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb6Q91XZ4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Gm8927-201ENSMUST00000181978 981 ntBASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Gm5867-201ENSMUST00000063197 592 ntBASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Gm3222-201ENSMUST00000071282 990 ntBASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb6Q91XZ4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms