Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Gm18889-201ENSMUST00000174284 929 ntBASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Gm18049-201ENSMUST00000208909 581 ntBASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga11Q91XY8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Gm25287-201ENSMUST00000103846 110 ntBASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Gm22918-201ENSMUST00000103855 110 ntBASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Gm5312-201ENSMUST00000203728 547 ntBASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga11Q91XY8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Pcdhga11Q91XY8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga11Q91XY8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga11Q91XY8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga11Q91XY8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga11Q91XY8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga11Q91XY8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga11Q91XY8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga11Q91XY8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga11Q91XY8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga11Q91XY8 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhga11Q91XY8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhga11Q91XY8 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga11Q91XY8 Mir6990-201ENSMUST00000183724 91 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms