Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc5Q91XW9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Gm4984-201ENSMUST00000115987 360 ntBASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Gm12341-201ENSMUST00000119724 503 ntBASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Gm9002-201ENSMUST00000178437 499 ntBASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Gm28911-201ENSMUST00000188837 117 ntBASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.89■□□□□ 0.13
Pcdhgc5Q91XW9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc5Q91XW9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Rubie-203ENSMUST00000227803 2430 ntBASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdhgc5Q91XW9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms