Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.81□□□□□ -0.04
TraipQ8VIG6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Gm44397-201ENSMUST00000195950 113 ntBASIC14.81□□□□□ -0.04
TraipQ8VIG6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.81□□□□□ -0.04
TraipQ8VIG6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Gm25857-201ENSMUST00000082788 129 ntBASIC14.81□□□□□ -0.04
TraipQ8VIG6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.81□□□□□ -0.04
TraipQ8VIG6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.81□□□□□ -0.04
TraipQ8VIG6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.81□□□□□ -0.04
TraipQ8VIG6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.81□□□□□ -0.04
TraipQ8VIG6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TraipQ8VIG6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TraipQ8VIG6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Gm14127-201ENSMUST00000117906 678 ntBASIC14.8□□□□□ -0.04
TraipQ8VIG6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Gm43221-201ENSMUST00000197612 2071 ntBASIC14.8□□□□□ -0.04
TraipQ8VIG6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TraipQ8VIG6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Gm12928-201ENSMUST00000117115 573 ntBASIC14.79□□□□□ -0.04
TraipQ8VIG6 Gm11814-201ENSMUST00000119515 929 ntBASIC14.79□□□□□ -0.04
TraipQ8VIG6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Gm25927-201ENSMUST00000175058 117 ntBASIC14.79□□□□□ -0.04
TraipQ8VIG6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Gm6266-201ENSMUST00000203844 806 ntBASIC14.79□□□□□ -0.04
TraipQ8VIG6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.79□□□□□ -0.04
TraipQ8VIG6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms