Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Gm14859-201ENSMUST00000117752 357 ntBASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Olfr129-201ENSMUST00000122318 993 ntBASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Gm7284-201ENSMUST00000131667 944 ntBASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc9Q8VC31 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Mir3081-201ENSMUST00000175305 84 ntBASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Gm27357-201ENSMUST00000183754 135 ntBASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc9Q8VC31 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms