Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Gm27920-201ENSMUST00000183953 96 ntBASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup35Q8R4R6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Gm9385-201ENSMUST00000117563 472 ntBASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Gm7461-201ENSMUST00000058918 827 ntBASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup35Q8R4R6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nup35Q8R4R6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Nup35Q8R4R6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nup35Q8R4R6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup35Q8R4R6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Nup35Q8R4R6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.35□□□□□ -0.59
Nup35Q8R4R6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nup35Q8R4R6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Nup35Q8R4R6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup35Q8R4R6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nup35Q8R4R6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms